STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42EP1CDC42 effector protein 1. (367 aa)    
Predicted Functional Partners:
SLC24A3
Solute carrier family 24 member 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.631
F6SXQ9_HORSE
Uncharacterized protein.
    
 0.629
CDC42
Cell division control protein 42-like protein.
    
 0.629
STXBP6
Syntaxin binding protein 6.
      
 0.616
RHOQ
Uncharacterized protein.
    
 0.592
RAC2
Rac family small GTPase 2.
    
 0.570
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.501
CD180
CD180 molecule.
     
 0.485
F6THK5_HORSE
Uncharacterized protein.
    
 0.483
ARHGEF16
Rho guanine nucleotide exchange factor 16.
      
 0.483
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.