STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM1Serine and arginine repetitive matrix 1. (915 aa)    
Predicted Functional Partners:
SRRM2
Serine/arginine repetitive matrix 2.
   
 0.992
RBM25
RNA binding motif protein 25.
   
 0.976
TCERG1
Transcription elongation regulator 1.
   
 0.969
PRPF38A
Pre-mRNA processing factor 38A.
   
 0.963
WBP11
WW domain binding protein 11.
   
 0.962
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.961
ALYREF
Aly/REF export factor.
    
 0.959
CDC40
Cell division cycle 40.
    
 0.956
SRRM3
Serine/arginine repetitive matrix 3.
   
 0.954
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.952
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.