STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD7BThrombospondin type 1 domain containing 7B. (1608 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
   
  
 0.740
RGL2
Ral guanine nucleotide dissociation stimulator like 2.
      
 0.568
MAP3K19
Mitogen-activated protein kinase kinase kinase 19.
      
 0.567
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
      
 0.565
GTDC1
Glycosyltransferase like domain containing 1.
      
 0.541
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.497
PIANP
PILR alpha associated neural protein.
   
  
 0.487
KLHDC9
Kelch domain containing 9.
   
  
 0.482
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
      
 0.481
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
      
 0.480
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.