STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100054254Ig-like domain-containing protein. (467 aa)    
Predicted Functional Partners:
KLRK1
Killer cell lectin like receptor K1.
   
 0.985
RAB5C
RAB5C, member RAS oncogene family.
   
 
 0.751
CD1D
Ig-like domain-containing protein.
   
 
 0.623
VAMP3
Vesicle associated membrane protein 3.
    
 0.543
RAB11A
RAB11A, member RAS oncogene family.
     
 0.522
HCST
Hematopoietic cell signal transducer.
   
 
 0.497
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.486
AP3D1
Adaptor related protein complex 3 subunit delta 1.
   
 
 0.478
CRYBA4
Crystallin beta A4; Belongs to the beta/gamma-crystallin family.
   
  
 0.472
CRYGB
Crystallin gamma B; Belongs to the beta/gamma-crystallin family.
      
 0.470
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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