STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSCAN12Zinc finger and SCAN domain containing 12. (620 aa)    
Predicted Functional Partners:
ARHGAP4
Rho GTPase activating protein 4.
      
 0.568
CAPN13
Calpain 13; Belongs to the peptidase C2 family.
   
 0.558
COMMD5
COMM domain containing 5.
     
 0.505
LOC100062763
Olfactory receptor.
      
 0.481
OR2B2
Olfactory receptor.
      
 0.476
OR2B6
Olfactory receptor.
      
 0.476
BRINP1
BMP/retinoic acid inducible neural specific 1.
      
 0.443
TLK1
Methyltransferase like 8.
      
 0.435
C1QTNF6
C1q and TNF related 6.
      
 0.433
FAM83A
Family with sequence similarity 83 member A.
    
 
 0.412
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.