STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM109Transmembrane protein 132A. (1105 aa)    
Predicted Functional Partners:
NAV2
Neuron navigator 2.
   
  
 0.799
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
      
 0.796
SYNDIG1
Synapse differentiation inducing 1.
   
  
 0.795
TMED6
GOLD domain-containing protein.
    
 
 0.705
TMEM59
Transmembrane protein 59.
   
 
 0.577
FAM160B2
Family with sequence similarity 160 member B2.
   
  
 0.570
PRAME
Preferentially expressed antigen in melanoma.
   
  
 0.537
PRAME-2
Uncharacterized protein.
   
  
 0.520
SCD
Stearoyl-CoA desaturase; Belongs to the fatty acid desaturase type 1 family.
   
  
 0.490
FAM20C
FAM20C golgi associated secretory pathway kinase.
   
 
  0.485
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.