STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD8Potassium channel tetramerization domain containing 8. (474 aa)    
Predicted Functional Partners:
YIPF7
Protein YIPF.
   
  
 0.888
GABRG1
Gamma-aminobutyric acid type A receptor gamma1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.746
PDCL2
Phosducin like 2.
      
 0.726
LRRC66
Leucine rich repeat containing 66.
     
 0.717
BEND4
BEN domain containing 4.
      
 0.716
RIMS4
Regulating synaptic membrane exocytosis 4.
   
  
 0.714
SHISA3
Shisa family member 3.
      
 0.693
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.685
USP46
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
      
 0.680
HTATSF1
HIV-1 Tat specific factor 1.
      
 0.672
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.