STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWA8Von Willebrand factor A domain containing 8. (1925 aa)    
Predicted Functional Partners:
UTS2B
Urotensin 2B.
      
 0.737
NEK10
NIMA related kinase 10.
    
 0.701
DIAPH3
Diaphanous related formin 3.
      
 0.695
C5H1orf194
Chromosome 5 C1orf194 homolog.
      
 0.670
SNTG1
Syntrophin gamma 1.
      
 0.651
MTMR10
Myotubularin related protein 10.
   
  
 0.649
FREM3
FRAS1 related extracellular matrix 3.
      
 0.649
MYO9A
Myosin IXA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.635
DDX10
RNA helicase.
   
 0.568
ERLEC1
Endoplasmic reticulum lectin 1.
   
  
 0.558
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.