STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQSEC1IQ motif and Sec7 domain 1. (1136 aa)    
Predicted Functional Partners:
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.761
MAU2
MAU2 sister chromatid cohesion factor.
   
  
 0.686
TBC1D25
TBC1 domain family member 25.
      
 0.682
NCOA7
Nuclear receptor coactivator 7.
      
 0.677
SEC14L2
Uncharacterized protein.
   
  
 0.569
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.562
LOC111768329
Transmembrane and coiled-coil domain-containing protein 5A-like.
      
 0.562
CALN1
Calneuron 1.
    
 
 0.524
PTPN12
Protein tyrosine phosphatase non-receptor type 12.
   
  
 0.516
NTNG2
Netrin G2.
   
 
 0.502
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.