STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC13Trafficking protein particle complex 13. (418 aa)    
Predicted Functional Partners:
TRAPPC12
Trafficking protein particle complex 12.
   
 0.995
TRAPPC11
Trafficking protein particle complex 11.
   
 0.990
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.988
TRAPPC8
Trafficking protein particle complex 8.
   
 0.978
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.976
TRAPPC2L
Trafficking protein particle complex 2 like.
   
 0.973
TRAPPC6A
Trafficking protein particle complex 6A.
   
 0.970
TRAPPC10
Uncharacterized protein.
   
 
 0.956
TRAPPC2
Trafficking protein particle complex 2.
   
 0.953
TRAPPC4
Trafficking protein particle complex 4.
   
 
 0.949
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.