STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHOX2Short stature homeobox 2. (333 aa)    
Predicted Functional Partners:
TBX18
T-box transcription factor 18.
   
 
 0.784
HCN4
Hyperpolarization activated cyclic nucleotide gated potassium channel 4.
      
 0.771
TBX3
T-box transcription factor 3.
    
 0.732
BANP
BTG3 associated nuclear protein.
    
 
 0.615
SOX5
SRY-box 5.
    
 
 0.589
GHITM
Growth hormone inducible transmembrane protein.
      
 0.569
TBX22
T-box transcription factor 22.
    
 
 0.524
RSRC1
Arginine and serine rich coiled-coil 1.
      
 0.520
SH3BGR
Uncharacterized protein.
      
 0.516
PRDM16
PR/SET domain 16.
   
 
 0.504
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.