STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECAP00000043225Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
VCPIP1
Valosin containing protein interacting protein 1.
    
 
 0.671
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 
 0.564
OTUD3
OTU deubiquitinase 3.
   
  
 0.537
OTUD5
OTU deubiquitinase 5.
      
 0.514
OTUB1
Uncharacterized protein.
    
 
 0.506
USP35
Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family.
   
  
 0.488
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
  
 0.485
OTUD1
OTU deubiquitinase 1.
      
 0.482
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.481
GAPT
GRB2 binding adaptor protein, transmembrane.
      
 0.479
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.