STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC11ASignal peptidase complex catalytic subunit SEC11. (183 aa)    
Predicted Functional Partners:
SPCS2
Signal peptidase complex subunit 2.
   
 0.998
SPCS3
Signal peptidase complex subunit 3.
   
 0.993
SPCS1
Signal peptidase complex subunit 1.
   
 0.985
POLR2G
RNA polymerase II subunit G.
 
 
    0.854
ENSECAP00000039928
Uncharacterized protein.
  
  
0.847
SEC11C
Signal peptidase complex catalytic subunit SEC11.
  
 
0.843
SSR3
Signal sequence receptor subunit 3.
   
 
 0.776
INSM2
INSM transcriptional repressor 2.
      
 0.767
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.720
PEX11A
Peroxisomal biogenesis factor 11 alpha.
      
 0.712
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.