STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPHK1Sphingosine kinase 1. (459 aa)    
Predicted Functional Partners:
SGPL1
Sphingosine-1-phosphate lyase 1.
 
 
 0.983
SGPP1
Sphingosine-1-phosphate phosphatase 1.
  
 0.976
LOC111770943
N-acylsphingosine amidohydrolase 1; Belongs to the acid ceramidase family.
     
 0.972
ASAH2
Neutral ceramidase.
    
 0.962
ACER1
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.962
ACER2
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.954
ACER3
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.953
SGPP2
Sphingosine-1-phosphate phosphatase 2.
  
 0.952
CERS6
Ceramide synthase 6.
     
 0.942
DEGS1
Delta 4-desaturase, sphingolipid 1.
    
 0.941
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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