STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100147208IRF tryptophan pentad repeat domain-containing protein. (431 aa)    
Predicted Functional Partners:
IRF4
Interferon regulatory factor 4.
     
 
0.900
TP53RK
TP53 regulating kinase.
      
 0.637
BATF3
Basic leucine zipper ATF-like transcription factor 3.
   
 
 0.593
ZNF341
Zinc finger protein 341.
    
 0.518
SNED1
Sushi, nidogen and EGF like domains 1.
    
 0.511
EXOC2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
      
 0.495
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.478
LMCD1
LIM and cysteine rich domains 1.
      
 0.472
IRF1
Interferon regulatory factor 1.
   
0.463
SPI1
Spi-1 proto-oncogene.
   
 
 0.450
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.