STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAC14VAC14 component of PIKFYVE complex. (809 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
    
 0.999
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
   
 0.996
RAD54L
RAD54 like.
 
 
   0.902
DIPK2A
Divergent protein kinase domain 2A.
    
 0.882
RAD54B
Uncharacterized protein.
 
 
   0.799
WIPI1
WD repeat domain, phosphoinositide interacting 1.
    
 
 0.747
CTC1
CST telomere replication complex component 1.
   
  
 0.719
VPS8
VPS8 subunit of CORVET complex.
   
  
 0.710
STK40
Serine/threonine kinase 40.
   
 
 0.701
CCZ1
Uncharacterized protein.
      
 0.697
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.