STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHMP7Charged multivesicular body protein 7. (473 aa)    
Predicted Functional Partners:
CHMP3
Uncharacterized protein.
   
 0.991
CHMP4C
Charged multivesicular body protein 4C.
    
0.987
CHMP4B
Charged multivesicular body protein 4B.
   
0.973
CHMP6
Charged multivesicular body protein 6.
   
0.973
VPS25
Vacuolar protein sorting 25 homolog.
    
 0.957
CHMP4A
Charged multivesicular body protein 4A.
   
 0.956
LEMD2
LEM domain containing 2.
   
 
 0.952
IST1
IST1 factor associated with ESCRT-III.
   
 0.950
MVB12B
Multivesicular body subunit 12B.
     
 0.942
CHMP5
Charged multivesicular body protein 5.
   
 0.929
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.