STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM5PDZ and LIM domain 5. (651 aa)    
Predicted Functional Partners:
PDLIM1
PDZ and LIM domain 1.
   
 
0.804
RSU1
Ras suppressor protein 1.
   
  
 0.668
PDLIM3
PDZ and LIM domain 3.
   
 
0.664
EHBP1
EH domain binding protein 1.
   
 0.644
EHBP1L1
C2 NT-type domain-containing protein.
   
 0.638
PDLIM4
PDZ and LIM domain 4.
     
 0.631
SORBS2
Sorbin and SH3 domain containing 2.
   
 0.624
STEAP1
Ferric oxidoreductase domain-containing protein.
      
 0.622
MYL10
Myosin light chain 10.
   
 0.615
PDLIM2
PDZ and LIM domain 2.
     
0.614
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.