STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH13Cadherin 13. (712 aa)    
Predicted Functional Partners:
CTNNB1
Beta catenin 1.
    
 0.843
JUP
Junction plakoglobin.
   
 0.830
CTNND1
Catenin delta 1.
    
 0.809
CTNNA1
Catenin alpha 1.
   
 0.798
CDH11
Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins.
   
 
0.767
CTNNA2
Catenin alpha 2.
    
 0.747
CDH9
Cadherin 9; Cadherins are calcium-dependent cell adhesion proteins.
     
0.740
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
     
0.734
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
     
0.729
CDH10
Cadherin 10; Cadherins are calcium-dependent cell adhesion proteins.
     
0.720
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.