STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL1LHFPL tetraspan subfamily member 1. (220 aa)    
Predicted Functional Partners:
ALG13
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
   
  
 0.669
LOC111767417
Glyco_tran_28_C domain-containing protein.
      
 0.578
AMOT
Angiomotin.
   
  
 0.503
SLCO6A1
Solute carrier organic anion transporter family member.
   
  
 0.498
TGM5
Transglutaminase 5.
   
  
 0.497
RTL4
Retrotransposon Gag like 4.
   
  
 0.494
API5
Tetratricopeptide repeat domain 17.
      
 0.489
LOC111769344
Glycine-N-acyltransferase like 3.
      
 0.489
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
      
 0.489
UBE4B
Ubiquitination factor E4B.
      
 0.487
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.