STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN5Calpain 5; Belongs to the peptidase C2 family. (745 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
 
 
 0.907
CAST
Calpastatin.
   
 0.752
TMEM63C
Transmembrane protein 63C.
      
 0.712
SOX12
Transcription factor SOX.
    
 
 0.665
PCGF5
Polycomb group RING finger protein 5-like protein.
    
 
 0.642
CAMTA2
Calmodulin binding transcription activator 2.
   
  
 0.641
TRIM9
Tripartite motif containing 9.
   
  
 0.637
ADCY4
Adenylate cyclase type 4; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
      
 0.562
AFAP1L2
Actin filament associated protein 1 like 2.
   
  
 0.555
CPNE4
Copine 4.
      
 0.538
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.