STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL5Cullin 5; Belongs to the cullin family. (780 aa)    
Predicted Functional Partners:
ELOC
Elongin C; Belongs to the SKP1 family.
   
 0.999
RNF7
Ring finger protein 7.
    
 0.999
RBX1
Ring-box 1.
    
 0.999
ELOB
Elongin B.
    
 0.999
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.985
SOCS2
Suppressor of cytokine signaling 2.
   
 0.979
ARIH2
RBR-type E3 ubiquitin transferase.
   
 0.962
APOBEC3H
CMP/dCMP-type deaminase domain-containing protein.
     
 0.958
CBFB
Core-binding factor subunit beta.
   
 
 0.955
ASB2
Ankyrin repeat and SOCS box containing 2.
    
 0.898
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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