STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASGEF1ARasGEF domain family member 1A. (541 aa)    
Predicted Functional Partners:
GLIPR2
GLI pathogenesis related 2; Belongs to the CRISP family.
   
  
 0.716
ATP6V1C2
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.711
CSTF2
Cleavage stimulation factor subunit 2.
      
 0.692
KLHL5
Kelch like family member 5.
   
  
 0.676
NUDT2
Nudix hydrolase 2.
      
 0.673
PLEKHG1
Pleckstrin homology and RhoGEF domain containing G1.
      
 0.655
BCORL1
BCL6 corepressor like 1.
      
 0.654
MGRN1
Mahogunin ring finger 1.
      
 0.654
BICD1
BICD cargo adaptor 1.
   
  
 0.653
ANGPTL3
Angiopoietin like 3.
     
 0.628
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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