STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100064553Keratin-associated protein 8-1. (63 aa)    
Predicted Functional Partners:
KRTAP11-1
Keratin associated protein 11-1.
   
 
 0.695
LOC111770797
Uncharacterized protein.
   
 
 0.692
LOC111770764
Uncharacterized protein.
   
  
 0.656
LOC100630522
Keratin-associated protein 7-1.
   
  
 0.656
KRTAP24-1
Keratin associated protein 24-1.
   
 
 0.626
LOC100053358
Uncharacterized protein.
   
  
 0.589
H2BC1
Histone H2B; Belongs to the histone H2B family.
   
    0.443
HAMP
Hepcidin antimicrobial peptide.
   
    0.443
LOC100053832
Keratin associated protein 3-1.
   
 
 0.442
ENSECAP00000031611
Uncharacterized protein.
   
 
 0.432
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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