DYRK1B protein (Equus caballus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DYRK1B

Dual specificity tyrosine phosphorylation regulated kinase 1B. (647 aa)

Predicted Functional Partners:

DCAF7

0.930

FAM76A

0.757

LIN52

0.715

FAM76B

0.703

STRADB

0.672

IFT80

0.651

MLLT3

0.615

CIRBP

0.608

KIAA0556

0.579

EP300

0.569

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CIRBP	DYRK1B	ENSECAP00000050887	ENSECAP00000045381	Cold inducible RNA binding protein.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.608
DCAF7	DYRK1B	ENSECAP00000013853	ENSECAP00000045381	DDB1 and CUL4 associated factor 7.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.930
DYRK1B	CIRBP	ENSECAP00000045381	ENSECAP00000050887	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Cold inducible RNA binding protein.	0.608
DYRK1B	DCAF7	ENSECAP00000045381	ENSECAP00000013853	Dual specificity tyrosine phosphorylation regulated kinase 1B.	DDB1 and CUL4 associated factor 7.	0.930
DYRK1B	EP300	ENSECAP00000045381	ENSECAP00000007916	Dual specificity tyrosine phosphorylation regulated kinase 1B.	E1A binding protein p300.	0.569
DYRK1B	FAM76A	ENSECAP00000045381	ENSECAP00000016986	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Family with sequence similarity 76 member A.	0.757
DYRK1B	FAM76B	ENSECAP00000045381	ENSECAP00000032415	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Family with sequence similarity 76 member B.	0.703
DYRK1B	IFT80	ENSECAP00000045381	ENSECAP00000007705	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Intraflagellar transport 80.	0.651
DYRK1B	KIAA0556	ENSECAP00000045381	ENSECAP00000033755	Dual specificity tyrosine phosphorylation regulated kinase 1B.	KIAA0556.	0.579
DYRK1B	LIN52	ENSECAP00000045381	ENSECAP00000020385	Dual specificity tyrosine phosphorylation regulated kinase 1B.	Lin-52 DREAM MuvB core complex component.	0.715
DYRK1B	MLLT3	ENSECAP00000045381	ENSECAP00000036359	Dual specificity tyrosine phosphorylation regulated kinase 1B.	MLLT3 super elongation complex subunit.	0.615
DYRK1B	STRADB	ENSECAP00000045381	ENSECAP00000015866	Dual specificity tyrosine phosphorylation regulated kinase 1B.	STE20 related adaptor beta.	0.672
EP300	DYRK1B	ENSECAP00000007916	ENSECAP00000045381	E1A binding protein p300.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.569
FAM76A	DYRK1B	ENSECAP00000016986	ENSECAP00000045381	Family with sequence similarity 76 member A.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.757
FAM76B	DYRK1B	ENSECAP00000032415	ENSECAP00000045381	Family with sequence similarity 76 member B.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.703
IFT80	DYRK1B	ENSECAP00000007705	ENSECAP00000045381	Intraflagellar transport 80.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.651
KIAA0556	DYRK1B	ENSECAP00000033755	ENSECAP00000045381	KIAA0556.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.579
LIN52	DYRK1B	ENSECAP00000020385	ENSECAP00000045381	Lin-52 DREAM MuvB core complex component.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.715
MLLT3	DYRK1B	ENSECAP00000036359	ENSECAP00000045381	MLLT3 super elongation complex subunit.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.615
STRADB	DYRK1B	ENSECAP00000015866	ENSECAP00000045381	STE20 related adaptor beta.	Dual specificity tyrosine phosphorylation regulated kinase 1B.	0.672