STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1A2Solute carrier organic anion transporter family member. (668 aa)    
Predicted Functional Partners:
ACOT11
Acyl-CoA thioesterase 11.
   
  
 0.973
LIX1
Limb and CNS expressed 1.
   
  
 0.944
RUBCNL
Rubicon like autophagy enhancer.
   
    0.941
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.941
C2H1orf109
Chromosome 2 C1orf109 homolog.
   
    0.941
PGM2
Phosphoglucomutase 2.
   
    0.941
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.924
SLCO1B3
Solute carrier organic anion transporter family member.
  
 
0.911
ZNF699
Zinc finger protein 699.
   
    0.874
ENSECAP00000049581
KRAB domain-containing protein.
   
    0.872
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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