STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1L2Target of myb1 like 2 membrane trafficking protein. (553 aa)    
Predicted Functional Partners:
RAI1
Retinoic acid induced 1.
   
  
 0.911
TNFRSF13B
TNF receptor superfamily member 13B.
   
  
 0.771
FLCN
UDENN FLCN/SMCR8-type domain-containing protein.
      
 0.750
CDCA2
Cell division cycle associated 2.
      
 0.740
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.678
TOLLIP
Toll interacting protein.
   
 
 0.626
RABGEF1
RAB guanine nucleotide exchange factor 1.
   
 
 0.619
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.571
ARL15
ADP ribosylation factor like GTPase 15.
   
 0.555
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.554
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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