STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM49BFamily with sequence similarity 49 member B. (494 aa)    
Predicted Functional Partners:
TMEM248
Transmembrane protein 248.
   
  
 0.740
NMT1
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.
   
  
 0.694
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
   
  
 0.685
PSME2
Proteasome activator subunit 2.
      
 0.635
RPL22
Ribosomal protein L22.
      
 0.589
DNAJB1
DnaJ heat shock protein family (Hsp40) member B1.
      
 0.566
UNKL
Unk like zinc finger.
    
 
 0.548
CLIC1
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
   
  
 0.535
EPB41L1
Erythrocyte membrane protein band 4.1 like 1.
      
 0.485
PTGS1
Prostaglandin-endoperoxide synthase 1.
      
 0.479
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.