STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN9Protein tyrosine phosphatase non-receptor type 9. (622 aa)    
Predicted Functional Partners:
SERINC1
Serine incorporator 1.
   
  
 0.726
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.725
AP4E1
AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system.
   
 0.716
TRAPPC8
Trafficking protein particle complex 8.
   
  
 0.694
LNPEP
Leucyl and cystinyl aminopeptidase.
     
 0.682
NREP
Neuronal regeneration related protein.
      
 0.647
DAGLB
Diacylglycerol lipase beta.
      
 0.646
GOLGA3
Golgin A3.
    
 0.624
RNF38
Ring finger protein 38.
   
 
 0.569
SERINC3
Serine incorporator 3.
   
  
 0.569
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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