STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTR1Cap methyltransferase 1. (835 aa)    
Predicted Functional Partners:
RNMT
mRNA cap guanine-N7 methyltransferase.
   
  
 0.757
NCAPH
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
      
 0.750
CCDC115
Coiled-coil domain containing 115.
      
 0.697
WDR7
WD repeat domain 7.
      
 0.661
SLC35A1
Solute carrier family 35 member A1.
   
  
 0.659
SCAF4
SR-related CTD associated factor 4.
   
  
 0.658
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.641
RBBP8NL
RBBP8 N-terminal like.
      
 0.632
PLEKHO2
Pleckstrin homology domain containing O2.
      
 0.632
DMRTC2
DMRT like family C2.
   
  
 0.624
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.