TNFRSF14 protein (Equus caballus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TNFRSF14

Uncharacterized protein. (366 aa)

Predicted Functional Partners:

TNFSF14

0.972

LTA

0.943

TRAF5

0.928

TRAF2

0.926

TNFSF18

0.718

TNFSF15

0.707

BTLA

0.698

HS3ST5

0.677

UBASH3A

0.664

TNFSF11

0.663

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTLA	LTA	ENSECAP00000014007	ENSECAP00000000706	B and T lymphocyte associated.	Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.	0.552
BTLA	TNFRSF14	ENSECAP00000014007	ENSECAP00000045957	B and T lymphocyte associated.	Uncharacterized protein.	0.698
BTLA	TNFSF14	ENSECAP00000014007	ENSECAP00000015089	B and T lymphocyte associated.	Tumor necrosis factor ligand 1D.	0.607
HS3ST5	TNFRSF14	ENSECAP00000015548	ENSECAP00000045957	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Uncharacterized protein.	0.677
LTA	BTLA	ENSECAP00000000706	ENSECAP00000014007	Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.	B and T lymphocyte associated.	0.552
LTA	TNFRSF14	ENSECAP00000000706	ENSECAP00000045957	Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.	Uncharacterized protein.	0.943
LTA	TNFSF11	ENSECAP00000000706	ENSECAP00000014214	Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.	Tumor necrosis factor ligand superfamily member.	0.603
LTA	TNFSF14	ENSECAP00000000706	ENSECAP00000015089	Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.	Tumor necrosis factor ligand 1D.	0.449
LTA	TRAF2	ENSECAP00000000706	ENSECAP00000011150	Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.474
TNFRSF14	BTLA	ENSECAP00000045957	ENSECAP00000014007	Uncharacterized protein.	B and T lymphocyte associated.	0.698
TNFRSF14	HS3ST5	ENSECAP00000045957	ENSECAP00000015548	Uncharacterized protein.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.677
TNFRSF14	LTA	ENSECAP00000045957	ENSECAP00000000706	Uncharacterized protein.	Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.	0.943
TNFRSF14	TNFSF11	ENSECAP00000045957	ENSECAP00000014214	Uncharacterized protein.	Tumor necrosis factor ligand superfamily member.	0.663
TNFRSF14	TNFSF14	ENSECAP00000045957	ENSECAP00000015089	Uncharacterized protein.	Tumor necrosis factor ligand 1D.	0.972
TNFRSF14	TNFSF15	ENSECAP00000045957	ENSECAP00000024070	Uncharacterized protein.	Tumor necrosis factor ligand 1B.	0.707
TNFRSF14	TNFSF18	ENSECAP00000045957	ENSECAP00000026343	Uncharacterized protein.	Tumor necrosis factor ligand 2A.	0.718
TNFRSF14	TRAF2	ENSECAP00000045957	ENSECAP00000011150	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.926
TNFRSF14	TRAF5	ENSECAP00000045957	ENSECAP00000005414	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.928
TNFRSF14	UBASH3A	ENSECAP00000045957	ENSECAP00000014730	Uncharacterized protein.	Ubiquitin associated and SH3 domain containing A.	0.664
TNFSF11	LTA	ENSECAP00000014214	ENSECAP00000000706	Tumor necrosis factor ligand superfamily member.	Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.	0.603