STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1079 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.929
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.881
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.878
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.863
RSF1
Remodeling and spacing factor 1.
   
 0.850
F6XTK8_HORSE
CBFD_NFYB_HMF domain-containing protein.
    
 0.845
CECR2
CECR2 histone acetyl-lysine reader.
   
 0.843
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
    
 0.811
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.752
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
    
 0.709
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.