STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCRT2Scratch family transcriptional repressor 2. (303 aa)    
Predicted Functional Partners:
N4BP3
NEDD4 binding protein 3.
      
 0.769
RAB28
RAB28, member RAS oncogene family.
      
 0.678
FOXJ2
Forkhead box J2.
      
 0.591
FOXK2
Forkhead box K2.
      
 0.574
RPS28
Ribosomal protein S28.
      
 0.537
GDF7
Growth differentiation factor 7.
      
 0.527
POU4F1
POU domain protein.
   
  
 0.526
TGM1
Transglutaminase 1.
      
 0.473
PROP1
PROP paired-like homeobox 1.
    
 
 0.471
CHCHD6
MICOS complex subunit; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.469
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.