STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MHCX1Ig-like domain-containing protein; Belongs to the MHC class I family. (589 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).
   
 0.837
RPA2
Replication protein A2.
   
 0.735
TAPBP
TAP binding protein.
   
 0.677
CD8A
CD8a molecule.
   
 0.669
TAP1
Transporter 1, ATP binding cassette subfamily B member.
   
 0.633
CALR
Calreticulin.
   
 0.593
LOC100062428
Calreticulin.
    
 0.579
ENSECAP00000032802
DUF1968 domain-containing protein.
   
  0.556
TAP2
Uncharacterized protein.
   
 0.526
PDIA3
Protein disulfide-isomerase.
   
 0.469
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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