STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YME1L1YME1 like 1 ATPase. (771 aa)    
Predicted Functional Partners:
TIMMDC1
Translocase of inner mitochondrial membrane domain containing 1.
   
   0.929
PARL
Presenilin associated rhomboid like.
   
 
 0.922
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
  
  
 0.900
OMA1
OMA1 zinc metallopeptidase.
  
 
 0.858
TTC16
Tetratricopeptide repeat domain 16.
    
 
 0.843
PHB2
Prohibitin.
   
 0.787
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
   0.777
YJEFN3
YjeF N-terminal domain-containing protein.
   
   0.777
LONP1
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial promoters and RNA in a single-stranded, site-specific, and strand- specific manner. May regulate mi [...]
  
 
 0.774
STOML2
Stomatin like 2.
   
 0.772
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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