STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR61WD repeat domain 61. (317 aa)    
Predicted Functional Partners:
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
CDC73
Cell division cycle 73.
    
 0.999
SKIV2L
Ski2 like RNA helicase.
   
 0.998
TTC37
Tetratricopeptide repeat domain 37.
    
 0.998
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.997
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.996
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.930
ELOC
Elongin C; Belongs to the SKP1 family.
     
 0.890
SUPT5H
Transcription elongation factor SPT5.
    
 0.886
ELOB
Elongin B.
     
 0.882
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.