STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCTP1Multiple C2 and transmembrane domain containing 1. (997 aa)    
Predicted Functional Partners:
ANKRD12
Ankyrin repeat domain 12.
   
 0.906
PRR32
Proline rich 32.
      
 0.839
KIAA0100
KIAA0100.
   
  
 0.836
FAM172A
Family with sequence similarity 172 member A.
   
  
 0.829
LMBR1
Limb development membrane protein 1; Belongs to the LIMR family.
      
 0.822
SLF1
SMC5-SMC6 complex localization factor 1.
    
 0.718
PRSS45
Serine protease 45, pseudogene; Belongs to the peptidase S1 family.
      
 0.702
ITSN2
Intersectin 2.
     
0.661
CHRM4
Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.
     
 0.573
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
   
  
 0.569
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.