STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBL5Ubiquitin like 5. (73 aa)    
Predicted Functional Partners:
MFAP1
Microfibrillar-associated protein 1-like protein.
    
 0.985
PRPF38A
Pre-mRNA processing factor 38A.
    
 0.983
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.979
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.966
TXNL4A
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
   
  0.965
ZMAT2
Zinc finger matrin-type 2.
   
 0.961
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 0.953
CDC40
Cell division cycle 40.
    
 0.953
WBP11
WW domain binding protein 11.
    
 0.953
PRPF6
Pre-mRNA processing factor 6.
    
 0.951
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.