STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC4DnaJ heat shock protein family (Hsp40) member C4. (249 aa)    
Predicted Functional Partners:
HSPA1A
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 
 
 0.663
XPO4
Exportin 4.
      
 0.628
SPATA21
Spermatogenesis associated 21.
   
  
 0.567
TRIML1
Tripartite motif family like 1.
      
 0.562
CDC5L
Cell division cycle 5 like.
    
 
 0.548
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
     
 0.515
MTX1
Metaxin 1.
   
  
 0.509
C15orf61
Chromosome 15 open reading frame 61.
      
 0.507
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
    
 
 0.507
C15orf62
Chromosome 15 open reading frame 62.
      
 0.507
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.