STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECAP00000047982Uncharacterized protein. (622 aa)    
Predicted Functional Partners:
ALYREF
Aly/REF export factor.
    
 0.992
NXT1
Nuclear transport factor 2 like export factor 1.
    
 0.986
RAE1
Ribonucleic acid export 1.
    
 0.982
NXT2
Nuclear transport factor 2 like export factor 2.
    
 0.973
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
    
 0.959
UPF3B
UPF3B regulator of nonsense mediated mRNA decay.
    
 0.954
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.942
THOC5
THO complex 5.
    
 0.940
TPR
Translocated promoter region, nuclear basket protein.
   
 0.827
SRSF1
Serine and arginine rich splicing factor 1.
   
 0.825
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.