STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC3H1Ring finger and CCCH-type domains 1. (1131 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.654
MYSM1
Myb like, SWIRM and MPN domains 1.
   
   0.586
CNOT7
CCR4-NOT transcription complex subunit 7.
   
 
 0.575
RC3H2
Ring finger and CCCH-type domains 2.
  
  
0.559
CNOT3
CCR4-NOT transcription complex subunit 3.
    
 
 0.536
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 
 0.535
ANKRD45
Ankyrin repeat domain 45.
    
 
 0.532
ZBTB37
Zinc finger and BTB domain containing 37.
   
 
 0.508
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.494
SLC9C2
Cyclic nucleotide-binding domain-containing protein.
      
 0.483
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.