STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL6Tubulin tyrosine ligase like 6. (858 aa)    
Predicted Functional Partners:
SNX11
Sorting nexin 11.
      
 0.805
COPZ2
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
      
 0.696
HOXB13
Homeobox B13.
      
 0.678
HOXB1
Homeobox B1.
   
  
 0.631
SMUG1
Single-strand-selective monofunctional uracil-DNA glycosylase 1.
      
 0.630
HOXB3
Homeobox B3.
      
 0.589
TTLL5
Tubulin tyrosine ligase like 5.
      
0.572
CEP41
Centrosomal protein 41.
      
 0.559
HOXB5
Homeobox B5.
      
 0.538
CBX1
Chromobox 1.
   
  
 0.518
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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