STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL5LHFPL tetraspan subfamily member 5. (281 aa)    
Predicted Functional Partners:
CIB2
Calcium and integrin binding family member 2.
   
 
 0.964
TMC1
Transmembrane channel-like protein.
   
 
 0.921
PCDH15
Protocadherin related 15.
   
 0.902
FKBP5
Peptidylprolyl isomerase.
   
  
 0.894
TGM7
Transglutaminase 7.
   
  
 0.863
TMC2
Transmembrane channel-like protein.
   
 
 0.844
OXSR1
Oxidative stress responsive kinase 1.
   
  
 0.770
TULP1
Tubby-like protein; Belongs to the TUB family.
   
  
 0.770
GCLC
Glutamate-cysteine ligase catalytic subunit.
      
 0.731
TMIE
Transmembrane inner ear.
     
 0.658
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.