STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf58Chromosome 5 open reading frame 58. (79 aa)    
Predicted Functional Partners:
TM6SF2
Transmembrane 6 superfamily member 2.
      
 0.852
HAPLN4
Hyaluronan and proteoglycan link protein 4.
      
 0.770
KCNIP1
Potassium voltage-gated channel interacting protein 1.
      
 0.766
CILP2
Cartilage intermediate layer protein 2.
      
 0.738
TSSK6
Testis specific serine kinase 6; Belongs to the protein kinase superfamily.
      
 0.737
CLEC16A
C-type lectin domain containing 16A.
      
 0.717
LPAR2
Lysophosphatidic acid receptor 2; Belongs to the G-protein coupled receptor 1 family.
      
 0.679
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.