STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSMD3CUB and Sushi multiple domains 3. (3707 aa)    
Predicted Functional Partners:
TMTC2
Transmembrane O-mannosyltransferase targeting cadherins 2.
   
 
 0.780
CCDC73
Coiled-coil domain containing 73.
   
  
 0.692
MCMBP
Minichromosome maintenance complex binding protein.
      
 0.682
ADD1
Adducin 1.
      
 0.676
AIMP2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
    
 
 0.671
CACNG5
Calcium voltage-gated channel auxiliary subunit gamma 5.
    
 0.660
OPCML
Opioid binding protein/cell adhesion molecule like.
   
 0.655
FMN1
Formin 1.
      
 0.654
ARMC4
Armadillo repeat containing 4.
   
  
 0.645
FANCE
FA complementation group E.
      
 0.635
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.