STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX30SRY-box 30. (773 aa)    
Predicted Functional Partners:
ZP2
Zona pellucida glycoprotein 2.
   
 0.710
ZNF84
Zinc finger protein 84.
    
 0.613
POU5F1
POU domain protein.
    
 0.577
SUN5
Sad1 and UNC84 domain containing 5.
   
 
 0.557
CCDC54
Coiled-coil domain containing 54.
   
  
 0.553
TOPAZ1
Testis and ovary specific PAZ domain containing 1.
    
 
 0.541
VSIG1
V-set and immunoglobulin domain containing 1.
   
  
 0.539
PIWIL1
Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
  
 0.517
ASPDH
Aspartate dehydrogenase domain containing.
      
 0.512
GDF3
Growth differentiation factor 3.
    
 0.505
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.