STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT78Keratin 78; Belongs to the intermediate filament family. (514 aa)    
Predicted Functional Partners:
WDPCP
WD repeat containing planar cell polarity effector.
      
 0.796
PGLYRP3
Peptidoglycan recognition protein 3.
   
  
 0.776
PGLYRP4
Peptidoglycan recognition protein 4.
   
  
 0.766
BAIAP2L2
BAI1 associated protein 2 like 2.
   
 0.733
CAMKK1
Calcium/calmodulin dependent protein kinase kinase 1.
    
 
 0.699
EHBP1
EH domain binding protein 1.
    
 
 0.698
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.696
OAF
POU domain protein.
    
 
 0.685
ATP5MC2
ATP synthase membrane subunit c locus 2; Belongs to the ATPase C chain family.
   
 
 0.583
KRT10B
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
0.539
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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