STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C19orf71Chromosome 19 open reading frame 71. (209 aa)    
Predicted Functional Partners:
EFHC2
EF-hand domain containing 2.
    
 
 0.933
EFCAB6
EF-hand calcium binding domain 6.
    
 
 0.932
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.900
CCDC114
Coiled-coil domain containing 114.
    
 
 0.894
TEKT3
Tektin 3.
    
 
 0.877
ARMC4
Armadillo repeat containing 4.
    
 
 0.858
EFHC1
EF-hand domain containing 1.
    
 
 0.846
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.831
TEKT1
Tektin 1.
    
 
 0.821
LOC100067446
Uncharacterized protein.
    
 
 0.821
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.