STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF130Ring finger protein 130. (418 aa)    
Predicted Functional Partners:
KLC1
Uncharacterized protein.
   
  
 0.625
PTPN2
Tyrosine-protein phosphatase non-receptor type.
   
 
 0.574
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.542
GTF2H5
General transcription factor IIH subunit 5.
     
 0.503
CPEB3
Cytoplasmic polyadenylation element binding protein 3.
   
  
 0.490
ITSN1
Intersectin 1.
   
  
 0.485
ATP2A2
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
    
 
 0.484
GRAMD4
GRAM domain containing 4.
   
  
 0.483
FAM131B
Family with sequence similarity 131 member B.
      
 0.477
UBXN4
UBX domain protein 4.
   
  
 0.470
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.