STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR20WD repeat domain 20. (627 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
   
 0.996
USP46
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
   
 0.960
USP12
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 0.955
USP1
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 0.781
TMEM74
Transmembrane protein 74.
   
  
 0.743
USP38
Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family.
   
 0.722
USP35
Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family.
   
 0.719
DCAF13
WD repeat and SOF domain-containing protein-like protein.
   
 
 0.710
PAK1IP1
PAK1 interacting protein 1.
   
  
 0.699
HTT
Huntingtin.
    
 0.669
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.